Publications

Research articles

  1. Ribeiro, R.P., Null, R.W., Ozpolat, D.B. (2025) Sex-biased gene expression precedes sexual dimorphism in the agonadal annelid Platynereis dumerilii. Development, 152 (7): dev204513.; Link
  1. Spieß, V.*, Ribeiro, R.P.*, Helm, C., Aguado, M.T. (2024) From two segments and beyond: investigating the onset of regeneration in Syllis malaquini (Syllidae, Annelida). Evolution & Development, e12492. Link *Authors with equal contributions.
  1. Ribeiro, R.P., Freitas, R., Zanol, J., Paiva, P.C., Fukuda, M.V., Guilment, T., Ruta, C. (2023) Genetic diversity of polychaete annelids from the Saint Peter and Saint Paul Archipelago, Equatorial Atlantic, with description of a new species. Regional Studies in Marine Science,68, 103243. Link.
  1. Ruta, C., Mundin, D., Freitas, R., Ribeiro, R.P. (2023) New species and record of Dodecaceria (Annelida: Cirratulidae) from the only atoll in the South Atlantic Ocean, the Biological Reserve of Rocas Atoll, Brazil. PLOS ONE, 18(10): e0293087. Link
  1. Freitas, R., Ribeiro, R.P., Ruta, C. (2022) Kirkegaardia Blake, 2016 (Annelida: Cirratulidae) from Southeastern Brazil with description of nine new species. PLOS ONE, 17(5):e0265336. Link
  1. Paula, M.S., Freitas, R., Barbosa, C.A.M., Ribeiro, R.P., Ruta, C. (2022) Bycatch of Asteroidea from shrimp trawl fishery in the southwestern Atlantic Ocean – Brazil. Papeis Avulsos de Zoologia. 62, e202262007. Link
  1. Aguado, M. T., Ponz-Segrelles, G., Glasby, C.J., Ribeiro, R.P., Nakamura, M., Oguchi, K., Omori, A., Kohtsuka, H., Fisher, C., Ise, Y., Jimi, N., Miura, T. (2022). Ramisyllis kingghidorahi, a new branching annelid from Japan. Organisms Diversity and Evolution, 22, 377–405. Link
  1. Ribeiro, R.P., Aguado, M.T. (2021) Effects of GSK3β inhibition in the regeneration of Syllis malaquini (Syllidae, Annelida). Development, Genes and Evolution, 231, 141–146. Link
  1. Ribeiro, R.P., Egger, B., Ponz-Segrelles, G., Aguado, M.T. (2021) Cellular proliferation dynamics during regeneration in Syllis malaquini (Syllidae, Annelida). Frontiers in Zoology, 18(1):1-16. Link
  1. Ponz-Segrelles, G., Glaby, C.J., Helm, C., Beckers, P.; Hammel, J.U., Ribeiro, R.P., Aguado, M.T. (2021). Integrative anatomical study of the branched annelid Ramisyllis multicaudata (Annelida, Syllidae). Journal of Morphology, 282(6): 900-916. Link
  1. Ponz-Segrelles, G., Ribeiro, R.P., Bleidorn, C., Aguado, M.T. (2020) Sex-specific gene expression differences in reproducing Syllis prolifera and Nudisyllis pulligera (Annelida, Syllidae). Marine Genomics, 54: 100772. Link
  1. Ribeiro, R.P., Ponz-Segrelles, G., Helm, C., Egger, B., Aguado, M.T. (2020) A new species of Syllis Grube, 1850 including transcriptomic data and an updated phylogeny of Syllinae (Annelida: Syllidae). Marine Biodiversity, 50:31. Link
  1. Ribeiro, R.P., Cruz, A.B., Freitas, R., Zanol, J., Glasby, C.J., Ruta, C. (2020) Pilargidae (Annelida: Phyllodocida) from coastal and deep waters of the Southwestern Atlantic, with descriptions of two new species. Zootaxa, 4878: 056–076. Link
  1. Ribeiro, R.P., Ponz-Segrelles, G., Bleidorn, C., Aguado, M.T. (2019) Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process. BMC Genomics, 20:855. Link
  1. Ribeiro, R.P., Alves, P.R., Almeida, Z.S., Ruta, C. (2018) A new species of Paraonis and an annotated checklist of polychaetes from mangroves of the Brazilian Amazon Coast (Annelida, Paraonidae). Zookeys, 740:1-34. Link
  1. Sousa, L.K.S., Cutrim, A.S.T., Ribeiro, R.P., Oliveira, V.M., Almeida, Z.S. (2018) Marine quality assessment of amazon mangroves using benthic and diversity indices based on polychaete fauna. Boletim do Laboratório de Hidrobiologia, 28: 11-22.Link
  1. Cutrim, A.S.T., Sousa, L.K.S, Ribeiro, R.P., Oliveira, V.M., Almeida, Z.S. (2018) Structure of a polychaete community in a mangrove in the northern coast of Brazil. Acta Biológica Colombiana, 23: 286-294. Link
  1. Rodrigues, C.A.L., Ribeiro, R.P.*, Santos, N.B., Almeida, Z.S. (2016) Patterns of mollusc distribution in mangroves from the São Marcos Bay, coast of Maranhão State, Brazil. Acta Amazonica, 46: 391-400. *RPR as corresponding author. Link

Reviews and book chapters

  1. Ponz-Segrelles, G., Ribeiro, R.P., Aguado, M.T. (2021) Monsters reveal patterns: annelids and their implications for the study of development and evolution. Biological Reviews, 97, 896–922. Review. Link
  1. Ribeiro, R.P., Bleidorn, C., Aguado, M.T. (2018) Regeneration mechanisms in Syllidae (Annelida). Regeneration, 5: 26-42. Review. Link
  1. Ribeiro, R.P., Almeida, Z.S. (2014) Polychaete annelids from the State of Maranhão, Brazil: history of knowledge. Bioikos, 28: 45-55. Review. [in Portuguese] Link
  1. Ribeiro, R.P., Almeida, Z.S. (2013) Polychaeta. In: Nunes, J.L.S.; Medonça, M.A. (Eds.). Marine biodiversity of São Luís Island. São Luís: EDUFMA, 2013, p. 79-94. Book chapter [in Portuguese]

Publications in teaching

  1. Ribeiro, R.P., Hernández-González. (2021) Gamizoo: providing a courseware for practical classes of Zoology. Revista Docência do Ensino Superior, 11: 1-20, 2021. Research article. [in Spanish] Link
  1. Marques, N.N.C.F., Ribeiro, R.P. (2016) An analysis of the contents of Biotechnology in the tests of the National High School Exam (ENEM). Pesquisa em Foco (UEMA), 21: 104-117, Research article. [in Portuguese]Link
  1. Ribeiro, R.P. (2017) Training Biology teachers: supervised internship experiences. 1. ed. Rio de Janeiro: Câmara Brasileira de Jovens escritores, 66p. Book [in Portuguese]
  1. Silva, J.R.S., Sousa, D.B.P., Cavalcanti, L.F., Ribeiro, R.P. (2016) Voices of (in) teaching: dialogue on pedagogical practices in Biological Sciences. In: Maria Cristina da Rosa Fonseca da Silva; Vera Márcia Marques Santos. (Eds.) Teacher training and public policies: scenarios and challenges. Florianópolis: Letras Contemporâneas, p. 212-230. Book chapter [in Portuguese]

Theses

  1. Ribeiro, R. P. (2021). Regeneration in Syllidae (Annelida): morphological, cellular and genetic background. Autonomous University of Madrid). Doctoral dissertation. Link
  1. Ribeiro, R. P. (2015) Morphological and molecular diversity of polychaetes from Saint Peter and Saint Paul Archipelago. Federal University of Rio de Janeiro. Master’s dissertation. [in Portuguese]
  1. Ribeiro, R. P. (2013) Characterization of the polychaete fauna in mangroves from two areas of the São Marcos Bay, Maranhão. State University of Maranhão. Bachelor’s thesis. [in Portuguese]